bioseq

Submodules

• bioseq.gc_count
• bioseq.reverse
• bioseq.transcribe

Attributes

__version__

Functions

transcribe(seq)	Transcribe the DNA sequence to RNA
reverse(seq)	Generate the reversal of the current DNA sequence.
gc_count(seq)	Calculate the GC content of a DNA Sequence

Package Contents

bioseq.transcribe(seq)

Transcribe the DNA sequence to RNA

Parameters:

seq (string) – Input DNA sequence

Returns:

Transcribed RNA sequence

Return type:

string

bioseq.reverse(seq)

Generate the reversal of the current DNA sequence.

Parameters:

seq (string) – Input DNA sequence.

Returns:

Reversal of the current DNA sequence.

Return type:

string

bioseq.gc_count(seq)

Calculate the GC content of a DNA Sequence

Parameters:

seq (string) – Input DNA Sequence

Returns:

ratio of GC in the DNA Sequence

Return type:

float

bioseq.__version__ = '1.1.0'